Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.05□□□□□ -2.24
CD74P04233 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.05□□□□□ -2.24
CD74P04233 TRMT112P2-201ENST00000512910 132 ntBASIC1.05□□□□□ -2.24
CD74P04233 TPRKBP2-201ENST00000565969 475 ntBASIC1.05□□□□□ -2.24
CD74P04233 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.05□□□□□ -2.24
CD74P04233 AC124303.1-201ENST00000605703 360 ntBASIC1.05□□□□□ -2.24
CD74P04233 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.05□□□□□ -2.24
CD74P04233 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
CD74P04233 AL078596.1-201ENST00000624856 447 ntBASIC1.05□□□□□ -2.24
CD74P04233 AL359697.1-201ENST00000624879 587 ntBASIC1.05□□□□□ -2.24
CD74P04233 MIR338-201ENST00000636369 67 ntBASIC1.05□□□□□ -2.24
CD74P04233 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.05□□□□□ -2.24
CD74P04233 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
CD74P04233 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
CD74P04233 Y_RNA.135-201ENST00000363439 95 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU6-727P-201ENST00000363592 107 ntBASIC1.04□□□□□ -2.24
CD74P04233 Y_RNA.295-201ENST00000364918 102 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU4-9P-201ENST00000364951 139 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU6-541P-201ENST00000384709 110 ntBASIC1.04□□□□□ -2.24
CD74P04233 MIR586-201ENST00000385035 97 ntBASIC1.04□□□□□ -2.24
CD74P04233 SNORD115-47-201ENST00000391226 86 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU6-373P-201ENST00000411247 98 ntBASIC1.04□□□□□ -2.24
CD74P04233 AC004965.1-201ENST00000413033 213 ntBASIC1.04□□□□□ -2.24
CD74P04233 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.04□□□□□ -2.24
CD74P04233 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.04□□□□□ -2.24
CD74P04233 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.04□□□□□ -2.24
CD74P04233 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.04□□□□□ -2.24
CD74P04233 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.04□□□□□ -2.24
CD74P04233 AL135790.2-201ENST00000437701 267 ntBASIC1.04□□□□□ -2.24
CD74P04233 MTATP6P13-201ENST00000438531 667 ntBASIC1.04□□□□□ -2.24
CD74P04233 DAP3P1-201ENST00000441522 278 ntBASIC1.04□□□□□ -2.24
CD74P04233 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.04□□□□□ -2.24
CD74P04233 AC004223.1-201ENST00000479840 271 ntBASIC1.04□□□□□ -2.24
CD74P04233 RPL26P26-201ENST00000480251 434 ntBASIC1.04□□□□□ -2.24
CD74P04233 AC092989.1-201ENST00000481235 277 ntBASIC1.04□□□□□ -2.24
CD74P04233 RPL30P10-201ENST00000488148 337 ntBASIC1.04□□□□□ -2.24
CD74P04233 AC079140.2-201ENST00000506193 142 ntBASIC1.04□□□□□ -2.24
CD74P04233 AC103851.1-201ENST00000506833 274 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU6-720P-201ENST00000516363 108 ntBASIC1.04□□□□□ -2.24
CD74P04233 SNORA25.14-201ENST00000516481 132 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU2-34P-201ENST00000516534 121 ntBASIC1.04□□□□□ -2.24
CD74P04233 RNU6-1314P-201ENST00000517139 104 ntBASIC1.04□□□□□ -2.24
CD74P04233 MTND1P5-201ENST00000517906 940 ntBASIC1.04□□□□□ -2.24
CD74P04233 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.04□□□□□ -2.24
CD74P04233 AL161670.1-201ENST00000554348 137 ntBASIC1.04□□□□□ -2.24
CD74P04233 SNORA77B-201ENST00000578179 125 ntBASIC1.04□□□□□ -2.24
CD74P04233 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.04□□□□□ -2.24
CD74P04233 ICE2P2-201ENST00000483823 2787 ntBASIC1.04□□□□□ -2.24
CD74P04233 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.03□□□□□ -2.24
CD74P04233 ZNF209P-201ENST00000593450 2304 ntBASIC1.03□□□□□ -2.24
CD74P04233 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
CD74P04233 snoU2-30.2-201ENST00000362805 70 ntBASIC1.03□□□□□ -2.24
CD74P04233 Y_RNA.226-201ENST00000364337 114 ntBASIC1.03□□□□□ -2.24
CD74P04233 SNORD87-201ENST00000364849 89 ntBASIC1.03□□□□□ -2.24
CD74P04233 RNU6-392P-201ENST00000364926 101 ntBASIC1.03□□□□□ -2.24
CD74P04233 Y_RNA.319-201ENST00000365138 92 ntBASIC1.03□□□□□ -2.24
CD74P04233 SNORA4.2-201ENST00000365313 147 ntBASIC1.03□□□□□ -2.24
CD74P04233 Y_RNA.453-201ENST00000384223 109 ntBASIC1.03□□□□□ -2.24
CD74P04233 RNA5SP467-201ENST00000391274 118 ntBASIC1.03□□□□□ -2.24
CD74P04233 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
CD74P04233 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.03□□□□□ -2.24
CD74P04233 AC009161.1-201ENST00000417306 376 ntBASIC1.03□□□□□ -2.24
CD74P04233 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.03□□□□□ -2.24
CD74P04233 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.03□□□□□ -2.24
CD74P04233 RNU6-1088P-201ENST00000516850 104 ntBASIC1.03□□□□□ -2.24
CD74P04233 RNA5SP54-201ENST00000516951 92 ntBASIC1.03□□□□□ -2.24
CD74P04233 RNU6-58P-201ENST00000517143 103 ntBASIC1.03□□□□□ -2.24
CD74P04233 AC019176.1-201ENST00000518519 225 ntBASIC1.03□□□□□ -2.24
CD74P04233 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.03□□□□□ -2.24
CD74P04233 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.03□□□□□ -2.24
CD74P04233 UBL5P4-201ENST00000562584 236 ntBASIC1.03□□□□□ -2.24
CD74P04233 MIR4421-201ENST00000578133 69 ntBASIC1.03□□□□□ -2.24
CD74P04233 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.03□□□□□ -2.24
CD74P04233 MIR4273-201ENST00000582824 84 ntBASIC1.03□□□□□ -2.24
CD74P04233 MIR3660-201ENST00000584845 100 ntBASIC1.03□□□□□ -2.24
CD74P04233 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.03□□□□□ -2.24
CD74P04233 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.03□□□□□ -2.24
CD74P04233 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.03□□□□□ -2.24
CD74P04233 MIR3662-201ENST00000637030 95 ntBASIC1.03□□□□□ -2.24
CD74P04233 RNU6-1059P-201ENST00000363752 98 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-873P-201ENST00000363833 107 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU4-40P-201ENST00000364351 143 ntBASIC1.02□□□□□ -2.25
CD74P04233 SNORA63D-201ENST00000364359 132 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-534P-201ENST00000364877 106 ntBASIC1.02□□□□□ -2.25
CD74P04233 SNORD1A-201ENST00000364968 72 ntBASIC1.02□□□□□ -2.25
CD74P04233 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CD74P04233 SNORA67.2-201ENST00000384300 149 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-1215P-201ENST00000384441 102 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-1065P-201ENST00000384513 106 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-831P-201ENST00000384548 107 ntBASIC1.02□□□□□ -2.25
CD74P04233 Y_RNA.533-201ENST00000384596 114 ntBASIC1.02□□□□□ -2.25
CD74P04233 Y_RNA.573-201ENST00000384763 105 ntBASIC1.02□□□□□ -2.25
CD74P04233 MIR153-2-201ENST00000385225 87 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNA5SP323-201ENST00000391094 133 ntBASIC1.02□□□□□ -2.25
CD74P04233 SNORA40.6-201ENST00000391153 128 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNA5SP504-201ENST00000410676 117 ntBASIC1.02□□□□□ -2.25
CD74P04233 RNU6-1148P-201ENST00000410992 104 ntBASIC1.02□□□□□ -2.25
CD74P04233 AL591704.2-201ENST00000421658 181 ntBASIC1.02□□□□□ -2.25
CD74P04233 AC027119.1-201ENST00000440877 241 ntBASIC1.02□□□□□ -2.25
CD74P04233 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms