Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nubp1Q9R060 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gm11025-201ENSMUST00000140773 466 ntBASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gm20825-201ENSMUST00000178149 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC14.09□□□□□ -0.15
Nubp1Q9R060 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.09□□□□□ -0.15
Nubp1Q9R060 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gm15590-201ENSMUST00000078419 552 ntBASIC14.09□□□□□ -0.15
Nubp1Q9R060 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nubp1Q9R060 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nubp1Q9R060 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nubp1Q9R060 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nubp1Q9R060 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.08□□□□□ -0.16
Nubp1Q9R060 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.08□□□□□ -0.16
Nubp1Q9R060 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nubp1Q9R060 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nubp1Q9R060 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm13418-201ENSMUST00000119097 944 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm15173-201ENSMUST00000122049 433 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Mir8117-201ENSMUST00000184773 107 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm6550-201ENSMUST00000187574 993 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.07□□□□□ -0.16
Nubp1Q9R060 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 AC106830.1-201ENSMUST00000228032 1003 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.07□□□□□ -0.16
Nubp1Q9R060 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nubp1Q9R060 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nubp1Q9R060 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms