Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Rfx5Q9JL61 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Rfx5Q9JL61 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Gm7153-201ENSMUST00000117092 455 ntBASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rfx5Q9JL61 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx5Q9JL61 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx5Q9JL61 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Rfx5Q9JL61 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rfx5Q9JL61 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Gm43347-201ENSMUST00000200226 580 ntBASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rfx5Q9JL61 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rfx5Q9JL61 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms