Protein–RNA interactions for Protein: Q9JKB3

Ybx3, Y-box-binding protein 3, mousemouse

Known RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx3Q9JKB3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ybx3Q9JKB3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ybx3Q9JKB3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.92■□□□□ 0.94
Ybx3Q9JKB3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ybx3Q9JKB3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ybx3Q9JKB3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Gm13453-201ENSMUST00000118708 357 ntBASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Gm12490-201ENSMUST00000120255 560 ntBASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 AC135669.1-201ENSMUST00000213585 412 ntBASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ybx3Q9JKB3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ybx3Q9JKB3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Gm6415-201ENSMUST00000118488 348 ntBASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ybx3Q9JKB3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 AC158538.2-201ENSMUST00000225455 906 ntBASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.88■□□□□ 0.93
Ybx3Q9JKB3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Ybx3Q9JKB3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.86■□□□□ 0.93
Ybx3Q9JKB3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms