Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rhox4bQ9JI43 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Gm5408-201ENSMUST00000197998 747 ntBASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rhox4bQ9JI43 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rhox4bQ9JI43 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rhox4bQ9JI43 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rhox4bQ9JI43 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms