Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.52■□□□□ 0.07
Ube4bQ9ES00 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Dio3-201ENSMUST00000097228 1449 ntBASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ube4bQ9ES00 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ube4bQ9ES00 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Mir2861-201ENSMUST00000175539 82 ntBASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.49■□□□□ 0.07
Ube4bQ9ES00 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms