Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Gm15321-201ENSMUST00000121290 288 ntBASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Gm14767-201ENSMUST00000121559 586 ntBASIC18.2■□□□□ 0.5
Upf1Q9EPU0 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Mir3102-201ENSMUST00000175555 104 ntBASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Gm9824-201ENSMUST00000178707 561 ntBASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Gm6218-201ENSMUST00000219812 628 ntBASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upf1Q9EPU0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Gm12008-201ENSMUST00000117791 755 ntBASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upf1Q9EPU0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Gm9908-201ENSMUST00000211534 448 ntBASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Upf1Q9EPU0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upf1Q9EPU0 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Gm17150-201ENSMUST00000165577 381 ntBASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Gm18018-201ENSMUST00000198273 408 ntBASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Gm45331-201ENSMUST00000209868 554 ntBASIC18.16■□□□□ 0.5
Upf1Q9EPU0 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Upf1Q9EPU0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm7775-201ENSMUST00000218871 853 ntBASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upf1Q9EPU0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms