Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm13884-201ENSMUST00000118103 829 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm28659-201ENSMUST00000188013 759 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44357-201ENSMUST00000195897 142 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm19658-201ENSMUST00000196231 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44367-201ENSMUST00000196836 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44350-201ENSMUST00000197197 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44390-201ENSMUST00000197533 144 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44313-201ENSMUST00000198018 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44486-201ENSMUST00000198508 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44314-201ENSMUST00000199263 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44394-201ENSMUST00000199558 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44484-201ENSMUST00000199873 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44466-201ENSMUST00000200264 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm44359-201ENSMUST00000200671 138 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm13830-205ENSMUST00000201195 1155 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 AC133598.3-202ENSMUST00000224219 531 ntBASIC21.11■□□□□ 0.97
U2af1Q9D883 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2af1Q9D883 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2af1Q9D883 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
U2af1Q9D883 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2af1Q9D883 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2af1Q9D883 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
U2af1Q9D883 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
U2af1Q9D883 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.1■□□□□ 0.97
U2af1Q9D883 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
U2af1Q9D883 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC21.1■□□□□ 0.97
U2af1Q9D883 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
U2af1Q9D883 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC21.09■□□□□ 0.97
U2af1Q9D883 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
U2af1Q9D883 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
U2af1Q9D883 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
U2af1Q9D883 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.09■□□□□ 0.97
U2af1Q9D883 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
U2af1Q9D883 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
U2af1Q9D883 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
U2af1Q9D883 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
U2af1Q9D883 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
U2af1Q9D883 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
U2af1Q9D883 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
U2af1Q9D883 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
U2af1Q9D883 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
U2af1Q9D883 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.08■□□□□ 0.97
U2af1Q9D883 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
U2af1Q9D883 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.08■□□□□ 0.97
U2af1Q9D883 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.08■□□□□ 0.97
U2af1Q9D883 AC164629.2-201ENSMUST00000217916 270 ntBASIC21.08■□□□□ 0.97
U2af1Q9D883 Gm6296-201ENSMUST00000222599 943 ntBASIC21.08■□□□□ 0.97
U2af1Q9D883 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
U2af1Q9D883 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.08■□□□□ 0.97
U2af1Q9D883 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
U2af1Q9D883 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
U2af1Q9D883 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
U2af1Q9D883 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
U2af1Q9D883 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
U2af1Q9D883 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
U2af1Q9D883 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
U2af1Q9D883 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.07■□□□□ 0.96
U2af1Q9D883 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.07■□□□□ 0.96
U2af1Q9D883 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
U2af1Q9D883 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC21.07■□□□□ 0.96
U2af1Q9D883 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
U2af1Q9D883 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms