Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.27■□□□□ 0.68
Chmp4cQ9D7F7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC19.27■□□□□ 0.67
Chmp4cQ9D7F7 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp4cQ9D7F7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC19.27■□□□□ 0.67
Chmp4cQ9D7F7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp4cQ9D7F7 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Gm45212-201ENSMUST00000205831 3403 ntBASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Gm18115-201ENSMUST00000221209 621 ntBASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp4cQ9D7F7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Gm18959-201ENSMUST00000208954 655 ntBASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp4cQ9D7F7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Gm26039-201ENSMUST00000158152 144 ntBASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Chmp4cQ9D7F7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Gm13474-201ENSMUST00000122466 815 ntBASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp4cQ9D7F7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms