Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Gm12821-201ENSMUST00000120022 600 ntBASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.5□□□□□ -0.25
ShpkQ9D5J6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Gm11927-201ENSMUST00000118472 759 ntBASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ShpkQ9D5J6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gm27454-201ENSMUST00000185090 204 ntBASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Mtag2-201ENSMUST00000058665 714 ntBASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ShpkQ9D5J6 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Phf7-203ENSMUST00000226565 1971 ntBASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ShpkQ9D5J6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ShpkQ9D5J6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms