Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ddx56Q9D0R4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ddx56Q9D0R4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ddx56Q9D0R4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Ddx56Q9D0R4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ddx56Q9D0R4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Ddx56Q9D0R4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Gm15794-201ENSMUST00000120182 631 ntBASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.89■□□□□ 0.29
Ddx56Q9D0R4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx56Q9D0R4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx56Q9D0R4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx56Q9D0R4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ddx56Q9D0R4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Ddx56Q9D0R4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms