Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tmem88Q9D0N8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Tmem88Q9D0N8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tmem88Q9D0N8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Gm26971-201ENSMUST00000182423 1072 ntBASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Tmem88Q9D0N8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tmem88Q9D0N8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms