Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gm18733-201ENSMUST00000173950 856 ntBASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gm6296-201ENSMUST00000222599 943 ntBASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lsm7Q9CQQ8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm7Q9CQQ8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm7Q9CQQ8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm7Q9CQQ8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lsm7Q9CQQ8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
Lsm7Q9CQQ8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Lsm7Q9CQQ8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44357-201ENSMUST00000195897 142 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm19658-201ENSMUST00000196231 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44367-201ENSMUST00000196836 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44350-201ENSMUST00000197197 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44390-201ENSMUST00000197533 144 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44313-201ENSMUST00000198018 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44486-201ENSMUST00000198508 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44314-201ENSMUST00000199263 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44394-201ENSMUST00000199558 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44484-201ENSMUST00000199873 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44466-201ENSMUST00000200264 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm44359-201ENSMUST00000200671 138 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Lsm7Q9CQQ8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Gm4459-201ENSMUST00000118750 468 ntBASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lsm7Q9CQQ8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Gm7862-201ENSMUST00000121461 292 ntBASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Gm4535-201ENSMUST00000182274 558 ntBASIC16.18■□□□□ 0.18
Lsm7Q9CQQ8 Gm8655-201ENSMUST00000221159 852 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms