Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Gm10052-201ENSMUST00000168019 960 ntBASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Gm7729-201ENSMUST00000050143 801 ntBASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim11Q99PQ2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Gm44430-201ENSMUST00000203376 995 ntBASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim11Q99PQ2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim11Q99PQ2 Gm9013-201ENSMUST00000132939 882 ntBASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim11Q99PQ2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim11Q99PQ2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Mir770-201ENSMUST00000103252 94 ntBASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Gm10231-201ENSMUST00000181584 441 ntBASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Gm10175-202ENSMUST00000208752 441 ntBASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim11Q99PQ2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms