Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Iqck-206ENSMUST00000208658 2891 ntBASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Gm7653-201ENSMUST00000214567 508 ntBASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh15Q99PJ1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Gm5779-201ENSMUST00000218467 910 ntBASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh15Q99PJ1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh15Q99PJ1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.08■□□□□ 0.48
Pcdh15Q99PJ1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh15Q99PJ1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.07■□□□□ 0.48
Pcdh15Q99PJ1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms