Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tlr3Q99MB1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tlr3Q99MB1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tlr3Q99MB1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tlr3Q99MB1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tlr3Q99MB1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.27■□□□□ 0.35
Tlr3Q99MB1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tlr3Q99MB1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tlr3Q99MB1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Gm15794-201ENSMUST00000120182 631 ntBASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tlr3Q99MB1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Gm27742-201ENSMUST00000184667 60 ntBASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tlr3Q99MB1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Gm44771-201ENSMUST00000206975 626 ntBASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tlr3Q99MB1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms