Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RtcbQ99LF4 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 AA543401-201ENSMUST00000164248 1269 ntBASIC19.81■□□□□ 0.76
RtcbQ99LF4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.81■□□□□ 0.76
RtcbQ99LF4 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.81■□□□□ 0.76
RtcbQ99LF4 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RtcbQ99LF4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.8■□□□□ 0.76
RtcbQ99LF4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.8■□□□□ 0.76
RtcbQ99LF4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RtcbQ99LF4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Gm18489-201ENSMUST00000172565 551 ntBASIC19.79■□□□□ 0.76
RtcbQ99LF4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Gm27321-201ENSMUST00000185021 205 ntBASIC19.79■□□□□ 0.76
RtcbQ99LF4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.79■□□□□ 0.76
RtcbQ99LF4 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.79■□□□□ 0.76
RtcbQ99LF4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RtcbQ99LF4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RtcbQ99LF4 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Gm5312-201ENSMUST00000203728 547 ntBASIC19.77■□□□□ 0.76
RtcbQ99LF4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RtcbQ99LF4 Gm13127-201ENSMUST00000118978 1389 ntBASIC19.77■□□□□ 0.76
RtcbQ99LF4 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms