Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.04■□□□□ 0.16
Cstf1Q99LC2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cstf1Q99LC2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Gm11025-201ENSMUST00000140773 466 ntBASIC16.02■□□□□ 0.16
Cstf1Q99LC2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cstf1Q99LC2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cstf1Q99LC2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cstf1Q99LC2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cstf1Q99LC2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.02■□□□□ 0.15
Cstf1Q99LC2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.02■□□□□ 0.15
Cstf1Q99LC2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cstf1Q99LC2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Gm9172-201ENSMUST00000212092 954 ntBASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cstf1Q99LC2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16■□□□□ 0.15
Cstf1Q99LC2 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC16■□□□□ 0.15
Cstf1Q99LC2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Gm44872-201ENSMUST00000207864 420 ntBASIC16■□□□□ 0.15
Cstf1Q99LC2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cstf1Q99LC2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16■□□□□ 0.15
Cstf1Q99LC2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms