Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Thumpd1Q99J36 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Gm44450-201ENSMUST00000199528 114 ntBASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Thumpd1Q99J36 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Thumpd1Q99J36 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Thumpd1Q99J36 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.33□□□□□ -0.11
Thumpd1Q99J36 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Thumpd1Q99J36 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Thumpd1Q99J36 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Thumpd1Q99J36 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Thumpd1Q99J36 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms