Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.24□□□□□ -0.13
Chmp1aQ921W0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Gm7638-201ENSMUST00000121348 967 ntBASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Chmp1aQ921W0 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp1aQ921W0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.21□□□□□ -0.13
Chmp1aQ921W0 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Gm12085-201ENSMUST00000119263 940 ntBASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Il3ra-202ENSMUST00000223589 738 ntBASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp1aQ921W0 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp1aQ921W0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms