Protein–RNA interactions for Protein: Q91ZW3

Smarca5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, mousemouse

Known RBP Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca5Q91ZW3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smarca5Q91ZW3 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smarca5Q91ZW3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smarca5Q91ZW3 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smarca5Q91ZW3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC19.71■□□□□ 0.75
Smarca5Q91ZW3 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.7■□□□□ 0.74
Smarca5Q91ZW3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms