Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha2Q91Y17 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Gm27459-201ENSMUST00000184860 107 ntBASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdha2Q91Y17 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Gm9172-201ENSMUST00000212092 954 ntBASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha2Q91Y17 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdha2Q91Y17 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Gm7153-201ENSMUST00000117092 455 ntBASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdha2Q91Y17 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha2Q91Y17 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdha2Q91Y17 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Pcdha2Q91Y17 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms