Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Gm15794-201ENSMUST00000120182 631 ntBASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Mir3081-201ENSMUST00000175305 84 ntBASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdha3Q91Y16 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdha3Q91Y16 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Gm18669-201ENSMUST00000216049 778 ntBASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdha3Q91Y16 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Gm9103-201ENSMUST00000119371 405 ntBASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Gm10819-201ENSMUST00000099988 561 ntBASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdha3Q91Y16 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms