Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb1Q91Y08 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb1Q91Y08 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Pcdhb1Q91Y08 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb1Q91Y08 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.71■□□□□ 0.26
Pcdhb1Q91Y08 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb1Q91Y08 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms