Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gm14659-201ENSMUST00000117667 843 ntBASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gm37604-201ENSMUST00000191749 1272 ntBASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gm44454-201ENSMUST00000198541 138 ntBASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdhb20Q91XZ9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Gm5970-201ENSMUST00000131638 1216 ntBASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Gm27741-201ENSMUST00000185060 237 ntBASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 AC165260.5-201ENSMUST00000224640 1247 ntBASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb20Q91XZ9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Gm22709-201ENSMUST00000116893 111 ntBASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb20Q91XZ9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Birc2-201ENSMUST00000054878 378 ntBASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Gm37648-201ENSMUST00000192072 2563 ntBASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb20Q91XZ9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Pcdhb20Q91XZ9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms