Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhga9Q91XX9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhga9Q91XX9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhga9Q91XX9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhga9Q91XX9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhga9Q91XX9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms