Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Gm6089-201ENSMUST00000197666 938 ntBASIC16.4■□□□□ 0.22
Lims2Q91XD2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.4■□□□□ 0.22
Lims2Q91XD2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Lims2Q91XD2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Lims2Q91XD2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.39■□□□□ 0.21
Lims2Q91XD2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Lims2Q91XD2 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC16.39■□□□□ 0.21
Lims2Q91XD2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Gm7461-201ENSMUST00000058918 827 ntBASIC16.39■□□□□ 0.21
Lims2Q91XD2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lims2Q91XD2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.38■□□□□ 0.21
Lims2Q91XD2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.38■□□□□ 0.21
Lims2Q91XD2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.38■□□□□ 0.21
Lims2Q91XD2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.38■□□□□ 0.21
Lims2Q91XD2 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.38■□□□□ 0.21
Lims2Q91XD2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.38■□□□□ 0.21
Lims2Q91XD2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.37■□□□□ 0.21
Lims2Q91XD2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Gm7230-201ENSMUST00000173026 815 ntBASIC16.37■□□□□ 0.21
Lims2Q91XD2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Lims2Q91XD2 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.37■□□□□ 0.21
Lims2Q91XD2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.37■□□□□ 0.21
Lims2Q91XD2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.37■□□□□ 0.21
Lims2Q91XD2 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Lims2Q91XD2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lims2Q91XD2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms