Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb17Q91VD8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb17Q91VD8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb17Q91VD8 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Gm15372-201ENSMUST00000120729 834 ntBASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb17Q91VD8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb17Q91VD8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms