Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
StrcQ8VIM6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
StrcQ8VIM6 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.08■□□□□ 0.64
StrcQ8VIM6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
StrcQ8VIM6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Gm27618-201ENSMUST00000183671 60 ntBASIC19.07■□□□□ 0.64
StrcQ8VIM6 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.07■□□□□ 0.64
StrcQ8VIM6 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.06■□□□□ 0.64
StrcQ8VIM6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.06■□□□□ 0.64
StrcQ8VIM6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
StrcQ8VIM6 CT030684.1-201ENSMUST00000227292 914 ntBASIC19.06■□□□□ 0.64
StrcQ8VIM6 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
StrcQ8VIM6 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
StrcQ8VIM6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
StrcQ8VIM6 Gm13823-201ENSMUST00000119930 345 ntBASIC19.04■□□□□ 0.64
StrcQ8VIM6 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.04■□□□□ 0.64
StrcQ8VIM6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Gm5779-201ENSMUST00000218467 910 ntBASIC19.04■□□□□ 0.64
StrcQ8VIM6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
StrcQ8VIM6 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
StrcQ8VIM6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
StrcQ8VIM6 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
StrcQ8VIM6 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
StrcQ8VIM6 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
StrcQ8VIM6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.02■□□□□ 0.64
StrcQ8VIM6 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.02■□□□□ 0.64
StrcQ8VIM6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms