Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.77□□□□□ -0.2
Cspg4Q8VHY0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gm8344-201ENSMUST00000119813 856 ntBASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cspg4Q8VHY0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cspg4Q8VHY0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm43433-201ENSMUST00000196573 481 ntBASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm45747-201ENSMUST00000212203 999 ntBASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm37153-201ENSMUST00000193637 231 ntBASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cspg4Q8VHY0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Gm22175-201ENSMUST00000175007 78 ntBASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.74□□□□□ -0.21
Cspg4Q8VHY0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms