Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Top1mtQ8R4U6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Top1mtQ8R4U6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Top1mtQ8R4U6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 AC114585.2-202ENSMUST00000228094 426 ntBASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Top1mtQ8R4U6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Top1mtQ8R4U6 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Top1mtQ8R4U6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms