Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Gm20049-201ENSMUST00000219950 730 ntBASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc58Q8R3Q6 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ccdc58Q8R3Q6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ccdc58Q8R3Q6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc58Q8R3Q6 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Gm7638-201ENSMUST00000121348 967 ntBASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc58Q8R3Q6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms