Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.85□□□□□ -0.03
Rfc3Q8R323 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.84□□□□□ -0.03
Rfc3Q8R323 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.84□□□□□ -0.03
Rfc3Q8R323 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Rfc3Q8R323 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
Rfc3Q8R323 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Rfc3Q8R323 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Gm10052-201ENSMUST00000168019 960 ntBASIC14.83□□□□□ -0.04
Rfc3Q8R323 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Gm7729-201ENSMUST00000050143 801 ntBASIC14.83□□□□□ -0.04
Rfc3Q8R323 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Rfc3Q8R323 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.82□□□□□ -0.04
Rfc3Q8R323 Gm43347-201ENSMUST00000200226 580 ntBASIC14.82□□□□□ -0.04
Rfc3Q8R323 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms