Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Ighv6-1-201ENSMUST00000193612 343 ntBASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Atf7Q8R0S1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Atf7Q8R0S1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19■□□□□ 0.63
Atf7Q8R0S1 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Atf7Q8R0S1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Atf7Q8R0S1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Atf7Q8R0S1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.97■□□□□ 0.63
Atf7Q8R0S1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.97■□□□□ 0.63
Atf7Q8R0S1 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Mir6404-201ENSMUST00000183699 94 ntBASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf7Q8R0S1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf7Q8R0S1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf7Q8R0S1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms