Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Gm18669-201ENSMUST00000216049 778 ntBASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sf3a1Q8K4Z5 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sf3a1Q8K4Z5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sf3a1Q8K4Z5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Gm9103-201ENSMUST00000119371 405 ntBASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Rprl3-201ENSMUST00000157400 290 ntBASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sf3a1Q8K4Z5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Sf3a1Q8K4Z5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3a1Q8K4Z5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3a1Q8K4Z5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Sf3a1Q8K4Z5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Sf3a1Q8K4Z5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Gm28033-201ENSMUST00000184224 96 ntBASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sf3a1Q8K4Z5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms