Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Paf1Q8K2T8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Gm21362-201ENSMUST00000194272 928 ntBASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.83■□□□□ 0.6
Paf1Q8K2T8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Rprl3-201ENSMUST00000157400 290 ntBASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Gm7367-201ENSMUST00000057611 492 ntBASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.82■□□□□ 0.6
Paf1Q8K2T8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.82■□□□□ 0.6
Paf1Q8K2T8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Paf1Q8K2T8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Paf1Q8K2T8 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Paf1Q8K2T8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms