Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Gm24841-201ENSMUST00000158676 357 ntBASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Gm27742-201ENSMUST00000184667 60 ntBASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Snrnp27Q8K194 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Rubie-203ENSMUST00000227803 2430 ntBASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Gm13216-201ENSMUST00000117145 591 ntBASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Gm7213-201ENSMUST00000215977 950 ntBASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Snrnp27Q8K194 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Il3ra-202ENSMUST00000223589 738 ntBASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Snrnp27Q8K194 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Birc2-201ENSMUST00000054878 378 ntBASIC16.02■□□□□ 0.16
Snrnp27Q8K194 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Snrnp27Q8K194 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Snrnp27Q8K194 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp27Q8K194 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Snrnp27Q8K194 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms