Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rfwd3Q8CIK8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm15794-201ENSMUST00000120182 631 ntBASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm7284-201ENSMUST00000131667 944 ntBASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm36967-201ENSMUST00000193814 266 ntBASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Gm44430-201ENSMUST00000203376 995 ntBASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfwd3Q8CIK8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Gm10052-201ENSMUST00000168019 960 ntBASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Gm7729-201ENSMUST00000050143 801 ntBASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfwd3Q8CIK8 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Rfwd3Q8CIK8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms