Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Brf1Q8CFK2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Mir3081-201ENSMUST00000175305 84 ntBASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Gm21362-201ENSMUST00000194272 928 ntBASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Brf1Q8CFK2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Brf1Q8CFK2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Gm27357-201ENSMUST00000183754 135 ntBASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Brf1Q8CFK2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brf1Q8CFK2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Brf1Q8CFK2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Brf1Q8CFK2 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC19.39■□□□□ 0.7
Brf1Q8CFK2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Ank2-226ENSMUST00000189368 339 ntBASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Brf1Q8CFK2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf1Q8CFK2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf1Q8CFK2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf1Q8CFK2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Brf1Q8CFK2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Brf1Q8CFK2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms