Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Mir6404-201ENSMUST00000183699 94 ntBASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Prpf31Q8CCF0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Gm25406-201ENSMUST00000157599 105 ntBASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Gm6376-201ENSMUST00000209407 580 ntBASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Prpf31Q8CCF0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Prpf31Q8CCF0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.53■□□□□ 0.4
Prpf31Q8CCF0 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms