Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Alx1Q8C8B0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm27741-201ENSMUST00000185060 237 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44357-201ENSMUST00000195897 142 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm19658-201ENSMUST00000196231 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44367-201ENSMUST00000196836 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44350-201ENSMUST00000197197 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44390-201ENSMUST00000197533 144 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44313-201ENSMUST00000198018 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44486-201ENSMUST00000198508 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44314-201ENSMUST00000199263 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44394-201ENSMUST00000199558 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44484-201ENSMUST00000199873 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44466-201ENSMUST00000200264 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm44359-201ENSMUST00000200671 138 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm8655-201ENSMUST00000221159 852 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Alx1Q8C8B0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Gm6296-201ENSMUST00000222599 943 ntBASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Alx1Q8C8B0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Alx1Q8C8B0 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Alx1Q8C8B0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.72■□□□□ 0.59
Alx1Q8C8B0 Gm18622-201ENSMUST00000219361 595 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms