Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.52■□□□□ 0.88
Ccdc60Q8C4J0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc60Q8C4J0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Ccdc60Q8C4J0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Gm9103-201ENSMUST00000119371 405 ntBASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ccdc60Q8C4J0 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccdc60Q8C4J0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Gm44454-201ENSMUST00000198541 138 ntBASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccdc60Q8C4J0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Gm12895-201ENSMUST00000122214 226 ntBASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.48■□□□□ 0.87
Ccdc60Q8C4J0 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ccdc60Q8C4J0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms