Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Gm15794-201ENSMUST00000120182 631 ntBASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trub1Q8C0D0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trub1Q8C0D0 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.59■□□□□ 0.25
Trub1Q8C0D0 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trub1Q8C0D0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trub1Q8C0D0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trub1Q8C0D0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trub1Q8C0D0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.58■□□□□ 0.25
Trub1Q8C0D0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trub1Q8C0D0 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
Trub1Q8C0D0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trub1Q8C0D0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trub1Q8C0D0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms