Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh3rf2Q8BZT2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh3rf2Q8BZT2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh3rf2Q8BZT2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh3rf2Q8BZT2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Gm6550-201ENSMUST00000187574 993 ntBASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh3rf2Q8BZT2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms