Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf7Q8BTV2 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Mir5122-201ENSMUST00000175004 89 ntBASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf7Q8BTV2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf7Q8BTV2 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Gm13836-201ENSMUST00000121159 501 ntBASIC16.1■□□□□ 0.17
Cpsf7Q8BTV2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms