Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.5■□□□□ 0.55
VmacQ8BP01 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Gm21362-201ENSMUST00000194272 928 ntBASIC18.5■□□□□ 0.55
VmacQ8BP01 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.5■□□□□ 0.55
VmacQ8BP01 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
VmacQ8BP01 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
VmacQ8BP01 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
VmacQ8BP01 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.49■□□□□ 0.55
VmacQ8BP01 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.49■□□□□ 0.55
VmacQ8BP01 Ank2-226ENSMUST00000189368 339 ntBASIC18.49■□□□□ 0.55
VmacQ8BP01 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.49■□□□□ 0.55
VmacQ8BP01 Gm7367-201ENSMUST00000057611 492 ntBASIC18.49■□□□□ 0.55
VmacQ8BP01 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
VmacQ8BP01 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.48■□□□□ 0.55
VmacQ8BP01 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Gm12895-201ENSMUST00000122214 226 ntBASIC18.48■□□□□ 0.55
VmacQ8BP01 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Gm9172-201ENSMUST00000212092 954 ntBASIC18.48■□□□□ 0.55
VmacQ8BP01 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VmacQ8BP01 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VmacQ8BP01 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VmacQ8BP01 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VmacQ8BP01 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.47■□□□□ 0.55
VmacQ8BP01 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VmacQ8BP01 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VmacQ8BP01 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VmacQ8BP01 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.46■□□□□ 0.55
VmacQ8BP01 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VmacQ8BP01 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VmacQ8BP01 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VmacQ8BP01 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VmacQ8BP01 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VmacQ8BP01 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms