Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Gm2274-201ENSMUST00000184539 609 ntBASIC17.27■□□□□ 0.36
Nop53Q8BK35 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.27■□□□□ 0.36
Nop53Q8BK35 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.27■□□□□ 0.36
Nop53Q8BK35 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nop53Q8BK35 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.27■□□□□ 0.35
Nop53Q8BK35 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nop53Q8BK35 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Gm7370-201ENSMUST00000219471 767 ntBASIC17.26■□□□□ 0.35
Nop53Q8BK35 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.26■□□□□ 0.35
Nop53Q8BK35 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nop53Q8BK35 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Gm13474-201ENSMUST00000122466 815 ntBASIC17.25■□□□□ 0.35
Nop53Q8BK35 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.25■□□□□ 0.35
Nop53Q8BK35 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.25■□□□□ 0.35
Nop53Q8BK35 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nop53Q8BK35 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Gm16061-201ENSMUST00000122167 857 ntBASIC17.24■□□□□ 0.35
Nop53Q8BK35 Gm45058-201ENSMUST00000205810 766 ntBASIC17.24■□□□□ 0.35
Nop53Q8BK35 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Gm18959-201ENSMUST00000208954 655 ntBASIC17.24■□□□□ 0.35
Nop53Q8BK35 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Nop53Q8BK35 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.23■□□□□ 0.35
Nop53Q8BK35 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Nop53Q8BK35 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms