Protein–RNA interactions for Protein: Q8BGD5

Cpt1c, Carnitine O-palmitoyltransferase 1, brain isoform, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1cQ8BGD5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cpt1cQ8BGD5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Cpt1cQ8BGD5 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cpt1cQ8BGD5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Mir6404-201ENSMUST00000183699 94 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gm44454-201ENSMUST00000198541 138 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gm43347-201ENSMUST00000200226 580 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cpt1cQ8BGD5 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cpt1cQ8BGD5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cpt1cQ8BGD5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cpt1cQ8BGD5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Gm12644-201ENSMUST00000119935 606 ntBASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cpt1cQ8BGD5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms