Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vrk1Q80X41 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vrk1Q80X41 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Vrk1Q80X41 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Vrk1Q80X41 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.33■□□□□ 0.04
Vrk1Q80X41 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vrk1Q80X41 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Haglr-201ENSMUST00000100000 2085 ntBASIC15.32■□□□□ 0.04
Vrk1Q80X41 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Gm4459-201ENSMUST00000118750 468 ntBASIC15.32■□□□□ 0.04
Vrk1Q80X41 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Gm36967-201ENSMUST00000193814 266 ntBASIC15.32■□□□□ 0.04
Vrk1Q80X41 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vrk1Q80X41 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm8097-201ENSMUST00000117903 829 ntBASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm11594-201ENSMUST00000122313 162 ntBASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.31■□□□□ 0.04
Vrk1Q80X41 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.31■□□□□ 0.04
Vrk1Q80X41 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vrk1Q80X41 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gm25925-201ENSMUST00000158314 306 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gm9172-201ENSMUST00000212092 954 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gm8655-201ENSMUST00000221159 852 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.3■□□□□ 0.04
Vrk1Q80X41 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Psmb5-202ENSMUST00000227257 622 ntBASIC15.3■□□□□ 0.04
Vrk1Q80X41 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vrk1Q80X41 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms