Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm24841-201ENSMUST00000158676 357 ntBASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm18959-201ENSMUST00000208954 655 ntBASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Srrm3Q80WV7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Srrm3Q80WV7 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 App-207ENSMUST00000227737 2827 ntBASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Gm12382-201ENSMUST00000122005 922 ntBASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Gm18032-201ENSMUST00000222541 538 ntBASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Srrm3Q80WV7 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm3Q80WV7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm3Q80WV7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm3Q80WV7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.77■□□□□ 0.27
Srrm3Q80WV7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Srrm3Q80WV7 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Srrm3Q80WV7 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Gm37025-201ENSMUST00000195159 829 ntBASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Gm43183-201ENSMUST00000200632 547 ntBASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.76■□□□□ 0.27
Srrm3Q80WV7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Srrm3Q80WV7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms